Re: FMCOMMS2 and Zedboard

Definitely you have a hardware-software mismatch.

You don't need those cores- for fmcomms2 you only need ad9361. You can look at what version the HDL is from the parameter list.

https://github.com/analogdevicesinc/fpgahdl_xilinx/blob/master/cf_lib/edk/pcores/axi_ad9361_v1_00_a/hdl/verilog/axi_ad9361.v

  parameter   PCORE_VERSION=32'h00060061;

And is the version the software that you have is looking for.